sample_id
stringlengths
15
15
population
stringclasses
7 values
region
stringclasses
5 values
is_SSA
bool
2 classes
is_reference_panel
bool
2 classes
sex
stringclasses
2 values
sequencing_center
stringclasses
5 values
sequencing_platform
stringclasses
3 values
library_batch
int64
1
12
run_year
int64
2.01k
2.02k
has_rna
bool
2 classes
rna_source
stringclasses
3 values
rna_rin
float64
1
10
rna_yield_ng
float64
20.9
5.43k
rna_read_count_millions
float64
5.02
85.2
rna_pct_q30
float64
70
100
rna_qc_rin_pass
bool
2 classes
rna_qc_read_count_pass
bool
2 classes
rna_qc_q30_pass
bool
2 classes
rna_qc_pass
bool
2 classes
has_dna
bool
2 classes
dna_source
stringclasses
3 values
dna_yield_ng
float64
48.4
6.56k
dna_mean_coverage
float64
24.1
118
dna_pct_bases_20x
float64
76.5
100
dna_duplication_rate
float64
0
0.46
dna_contamination_pct
float64
0
3.17
dna_qc_coverage_pass
bool
2 classes
dna_qc_pct20x_pass
bool
2 classes
dna_qc_duplication_pass
bool
2 classes
dna_qc_contamination_pass
bool
2 classes
dna_qc_pass
bool
2 classes
DQ_SAMPLE_00001
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
4
2,023
true
FFPE
3.27
176.7
49.26
89.78
false
true
true
false
true
FFPE
242.9
50.96
96.24
0.271
1.99
true
true
false
true
false
DQ_SAMPLE_00002
SSA_West
West
true
false
Female
Lab_B_USA
NextSeq550
9
2,020
false
null
null
null
null
null
false
false
false
false
true
FFPE
263.5
62.66
97.54
0.272
0.05
true
true
false
true
false
DQ_SAMPLE_00003
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
11
2,017
true
FFPE
4.1
505.8
30.81
83.33
false
true
true
false
true
FFPE
151.8
49.73
91.14
0.169
1.13
true
true
true
true
true
DQ_SAMPLE_00004
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
3
2,012
true
FFPE
5.58
215.6
28.85
92.68
false
true
true
false
true
Blood
644.2
70.74
87.5
0.158
0.53
true
true
true
true
true
DQ_SAMPLE_00005
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
12
2,013
false
null
null
null
null
null
false
false
false
false
true
Blood
459
75.27
85.9
0.147
1.01
true
true
true
true
true
DQ_SAMPLE_00006
SSA_West
West
true
false
Male
Lab_SSA_1
HiSeq4000
3
2,021
true
Fresh_frozen
6.87
967.7
31.24
90.99
true
true
true
true
true
Fresh_frozen
509
68.95
90.08
0.169
0.82
true
true
true
true
true
DQ_SAMPLE_00007
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
12
2,019
true
FFPE
4.77
581.8
39.99
86.32
false
true
true
false
true
Fresh_frozen
500.8
64.63
89.18
0.223
1.34
true
true
true
true
true
DQ_SAMPLE_00008
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
11
2,021
true
FFPE
3.22
201.3
57.46
95.75
false
true
true
false
true
FFPE
265.7
70.13
87.8
0.318
1.02
true
true
false
true
false
DQ_SAMPLE_00009
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
8
2,012
true
Blood_PAXgene
6.54
1,382.2
48.42
93.36
true
true
true
true
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00010
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
1
2,016
true
Fresh_frozen
6.25
390.1
34.78
84.79
false
true
true
false
true
FFPE
739.7
63.4
93.59
0.273
1.55
true
true
false
true
false
DQ_SAMPLE_00011
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
7
2,022
false
null
null
null
null
null
false
false
false
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00012
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
4
2,021
true
FFPE
5.92
298.9
43.24
89.75
false
true
true
false
true
FFPE
221.5
59.89
90.41
0.302
1.2
true
true
false
true
false
DQ_SAMPLE_00013
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
10
2,022
true
FFPE
5.34
507.6
40.72
85.43
false
true
true
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00014
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
6
2,014
true
FFPE
5.29
307.2
49.95
87.62
false
true
true
false
true
FFPE
196
77.19
95.41
0.171
0.52
true
true
true
true
true
DQ_SAMPLE_00015
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
5
2,018
true
FFPE
4.16
187.4
67.18
88.81
false
true
true
false
true
FFPE
286.2
46.92
93.38
0.281
1.45
true
true
false
true
false
DQ_SAMPLE_00016
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
3
2,013
true
FFPE
4.26
125.8
38.61
81.8
false
true
true
false
true
FFPE
342.2
63.63
92.01
0.321
0.35
true
true
false
true
false
DQ_SAMPLE_00017
SSA_West
West
true
false
Female
Lab_A_EUR
NovaSeq6000
5
2,013
true
Blood_PAXgene
7.22
441.5
49.23
91.46
true
true
true
true
true
Fresh_frozen
1,156.8
69.45
90.8
0.168
0.75
true
true
true
true
true
DQ_SAMPLE_00018
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
1
2,013
true
FFPE
5.14
292
51.27
85.31
false
true
true
false
true
FFPE
82.4
62.82
88.12
0.306
0.93
true
true
false
true
false
DQ_SAMPLE_00019
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
3
2,015
true
FFPE
4.66
250.8
22.37
83.15
false
true
true
false
true
Blood
978.7
72.3
85.79
0.162
1.37
true
true
true
true
true
DQ_SAMPLE_00020
SSA_West
West
true
false
Female
Lab_A_EUR
NovaSeq6000
9
2,016
true
Fresh_frozen
8.55
790.5
58.04
88
true
true
true
true
true
Fresh_frozen
625
101.57
97.42
0.03
1.32
true
true
true
true
true
DQ_SAMPLE_00021
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
12
2,019
true
Fresh_frozen
7.32
491.3
25.47
81.64
true
true
true
true
true
Fresh_frozen
751.7
66.2
90.54
0.132
1.5
true
true
true
true
true
DQ_SAMPLE_00022
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
10
2,015
true
FFPE
4.67
248.6
27.8
88.51
false
true
true
false
true
Fresh_frozen
445.7
58.18
94.14
0.182
0
true
true
true
true
true
DQ_SAMPLE_00023
SSA_West
West
true
false
Male
Lab_SSA_2
HiSeq4000
11
2,019
true
FFPE
5.57
392.2
24.64
87.2
false
true
true
false
true
Fresh_frozen
157.9
67.38
100
0.181
2.35
true
true
true
true
true
DQ_SAMPLE_00024
SSA_West
West
true
false
Female
Lab_B_USA
NovaSeq6000
4
2,022
false
null
null
null
null
null
false
false
false
false
true
FFPE
261.4
61.08
85.52
0.256
0.48
true
true
false
true
false
DQ_SAMPLE_00025
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
4
2,018
true
FFPE
5
410.8
33.89
81.84
false
true
true
false
true
FFPE
319.8
67.5
91
0.243
1.91
true
true
true
true
true
DQ_SAMPLE_00026
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
7
2,019
true
FFPE
4.17
209.7
15.19
87.89
false
false
true
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00027
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
12
2,018
true
FFPE
5.83
239.3
29.36
92.5
false
true
true
false
true
Blood
587.5
78.65
95.91
0.09
1.1
true
true
true
true
true
DQ_SAMPLE_00028
SSA_West
West
true
false
Female
Lab_C_EAS
HiSeq4000
4
2,022
true
Fresh_frozen
6.67
721
37.97
83.69
true
true
true
true
true
Fresh_frozen
552.9
67.6
93.46
0.138
2.06
true
true
true
true
true
DQ_SAMPLE_00029
SSA_West
West
true
false
Female
Lab_C_EAS
HiSeq4000
10
2,016
true
Fresh_frozen
8.62
1,149.9
57.65
84.81
true
true
true
true
true
FFPE
553.3
67.96
94.85
0.202
0.77
true
true
true
true
true
DQ_SAMPLE_00030
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
3
2,012
true
Blood_PAXgene
5.94
299
42.98
86.33
false
true
true
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00031
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
2
2,021
true
Fresh_frozen
7.11
1,128.2
40.45
79.88
true
true
false
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00032
SSA_West
West
true
false
Male
Lab_SSA_2
HiSeq4000
1
2,018
true
FFPE
4.73
496.7
34.95
89.26
false
true
true
false
true
FFPE
194.4
60.34
85.38
0.324
1.41
true
true
false
true
false
DQ_SAMPLE_00033
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
1
2,014
false
null
null
null
null
null
false
false
false
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00034
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
12
2,021
true
FFPE
5.18
142.2
25.35
88.88
false
true
true
false
true
Fresh_frozen
1,125.2
64.16
87.15
0.143
0.97
true
true
true
true
true
DQ_SAMPLE_00035
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
4
2,013
true
Fresh_frozen
8.03
548.5
37.81
84.6
true
true
true
true
true
FFPE
544.9
49.24
89.71
0.246
0.88
true
true
true
true
true
DQ_SAMPLE_00036
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
4
2,019
true
FFPE
6.08
317.7
57.67
89.47
false
true
true
false
true
FFPE
265.6
65.81
89.97
0.221
0.8
true
true
true
true
true
DQ_SAMPLE_00037
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
9
2,021
true
FFPE
2.45
313.2
59.1
89.84
false
true
true
false
true
Fresh_frozen
2,368.3
66.98
93.56
0.141
0.81
true
true
true
true
true
DQ_SAMPLE_00038
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
7
2,022
true
FFPE
4.27
141.2
60
95.01
false
true
true
false
true
Fresh_frozen
312.2
86.9
90.42
0.134
0.43
true
true
true
true
true
DQ_SAMPLE_00039
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
5
2,018
false
null
null
null
null
null
false
false
false
false
true
FFPE
317.1
40.14
83.74
0.169
1.48
true
true
true
true
true
DQ_SAMPLE_00040
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
12
2,013
true
FFPE
3.95
124.3
29.98
84.94
false
true
true
false
true
FFPE
485.3
61.47
96.68
0.34
0.26
true
true
false
true
false
DQ_SAMPLE_00041
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
6
2,012
true
Fresh_frozen
8.15
1,622.7
52.85
93.92
true
true
true
true
true
FFPE
519
65.67
91.87
0.314
0.15
true
true
false
true
false
DQ_SAMPLE_00042
SSA_West
West
true
false
Female
Lab_B_USA
NovaSeq6000
2
2,013
false
null
null
null
null
null
false
false
false
false
true
Fresh_frozen
1,486.3
103.83
91.38
0.081
0.89
true
true
true
true
true
DQ_SAMPLE_00043
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
11
2,020
true
FFPE
5.02
674.2
30.01
85.35
false
true
true
false
true
FFPE
286.2
72.18
92.32
0.241
1.45
true
true
true
true
true
DQ_SAMPLE_00044
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
2
2,017
true
FFPE
3.76
180.7
47.54
95.29
false
true
true
false
true
Fresh_frozen
197.9
62.49
91.07
0.227
0.9
true
true
true
true
true
DQ_SAMPLE_00045
SSA_West
West
true
false
Female
Lab_C_EAS
HiSeq4000
2
2,017
true
Blood_PAXgene
8.67
279.4
42.6
91.3
true
true
true
true
true
Fresh_frozen
626.7
70.91
94.75
0.153
1.21
true
true
true
true
true
DQ_SAMPLE_00046
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
8
2,021
true
FFPE
4.12
397
36.26
87.61
false
true
true
false
true
FFPE
247
74.3
83.56
0.239
1.91
true
true
true
true
true
DQ_SAMPLE_00047
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
7
2,018
true
FFPE
6.73
150.9
40.53
81.56
true
true
true
true
true
Blood
363.1
77.8
97.74
0.156
1.66
true
true
true
true
true
DQ_SAMPLE_00048
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
1
2,024
true
FFPE
4.4
260.4
41.03
84.07
false
true
true
false
true
Fresh_frozen
1,249.6
87.6
90.85
0.144
0.03
true
true
true
true
true
DQ_SAMPLE_00049
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
12
2,018
true
Fresh_frozen
7.88
394.5
42.66
88.55
true
true
true
true
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00050
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
2
2,012
true
Blood_PAXgene
6.12
631.4
30.28
84.35
false
true
true
false
true
Fresh_frozen
940.1
81.52
91.34
0.116
1.28
true
true
true
true
true
DQ_SAMPLE_00051
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
6
2,016
true
FFPE
3.84
733.9
48.66
95.66
false
true
true
false
true
FFPE
224.7
49.53
87.33
0.257
1.48
true
true
false
true
false
DQ_SAMPLE_00052
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
11
2,024
true
FFPE
4.65
197.2
48.72
92.95
false
true
true
false
true
FFPE
394.8
48
92.96
0.155
0.79
true
true
true
true
true
DQ_SAMPLE_00053
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
5
2,012
true
FFPE
5.19
147.6
46.76
96.04
false
true
true
false
true
Blood
812.8
67.61
89.16
0.173
1.29
true
true
true
true
true
DQ_SAMPLE_00054
SSA_West
West
true
false
Female
Lab_B_USA
HiSeq4000
3
2,012
true
FFPE
5.85
182
40.68
86.76
false
true
true
false
true
FFPE
307.4
57.58
87.89
0.133
0.62
true
true
true
true
true
DQ_SAMPLE_00055
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
4
2,012
true
FFPE
4.37
131.9
47.79
83.74
false
true
true
false
true
Fresh_frozen
1,101.2
88.06
95.24
0.189
0
true
true
true
true
true
DQ_SAMPLE_00056
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
10
2,024
true
Blood_PAXgene
5.73
164.2
51.71
88.12
false
true
true
false
true
FFPE
279.9
74.61
92.64
0.386
0.5
true
true
false
true
false
DQ_SAMPLE_00057
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
10
2,020
false
null
null
null
null
null
false
false
false
false
true
Fresh_frozen
841.6
71.19
89.48
0.225
1.31
true
true
true
true
true
DQ_SAMPLE_00058
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
6
2,012
true
FFPE
5.88
332.9
56.4
86.85
false
true
true
false
true
Blood
250.6
63.77
90.42
0.185
1.19
true
true
true
true
true
DQ_SAMPLE_00059
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
11
2,013
false
null
null
null
null
null
false
false
false
false
true
FFPE
353.7
51.54
94.92
0.269
1.28
true
true
false
true
false
DQ_SAMPLE_00060
SSA_West
West
true
false
Female
Lab_A_EUR
HiSeq4000
10
2,016
true
FFPE
5.54
70.4
38.7
88.88
false
true
true
false
true
FFPE
731.2
55.75
94.91
0.187
1.13
true
true
true
true
true
DQ_SAMPLE_00061
SSA_West
West
true
false
Female
Lab_C_EAS
HiSeq4000
12
2,017
false
null
null
null
null
null
false
false
false
false
true
Fresh_frozen
549.1
78.5
93.15
0.172
2.09
true
true
true
true
true
DQ_SAMPLE_00062
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
2
2,022
true
FFPE
3.91
907.8
55.67
86.29
false
true
true
false
true
FFPE
415.1
42.61
98.41
0.298
0.39
true
true
false
true
false
DQ_SAMPLE_00063
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
3
2,023
true
FFPE
5.07
125.4
72.37
91.56
false
true
true
false
true
FFPE
429.3
50.31
94.97
0.327
0.66
true
true
false
true
false
DQ_SAMPLE_00064
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
2
2,023
true
FFPE
4.58
252.3
28.06
87.72
false
true
true
false
true
FFPE
438
65.45
89.75
0.362
0.41
true
true
false
true
false
DQ_SAMPLE_00065
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
7
2,014
true
FFPE
5.09
180.7
37.1
90.28
false
true
true
false
true
Fresh_frozen
1,363.4
74.24
90.8
0.112
0.72
true
true
true
true
true
DQ_SAMPLE_00066
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
6
2,015
true
Blood_PAXgene
5.65
225.5
36.29
88.56
false
true
true
false
true
Fresh_frozen
1,658.6
73.01
87.74
0.141
1.44
true
true
true
true
true
DQ_SAMPLE_00067
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
1
2,015
true
FFPE
4.81
96.7
41.75
91.78
false
true
true
false
true
FFPE
416.2
54.26
88.83
0.254
1.69
true
true
false
true
false
DQ_SAMPLE_00068
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
3
2,016
false
null
null
null
null
null
false
false
false
false
true
Fresh_frozen
769.5
91.29
83.9
0.129
0.09
true
true
true
true
true
DQ_SAMPLE_00069
SSA_West
West
true
false
Female
Lab_B_USA
NovaSeq6000
7
2,023
true
FFPE
3.65
276.4
58.31
90.38
false
true
true
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00070
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
11
2,018
true
FFPE
4.91
1,971.3
52.65
87.21
false
true
true
false
true
Blood
498.3
58.01
88.54
0.21
0.98
true
true
true
true
true
DQ_SAMPLE_00071
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
9
2,022
true
FFPE
5.05
370.2
35.96
81.98
false
true
true
false
true
FFPE
495.4
62.01
87.82
0.273
0.66
true
true
false
true
false
DQ_SAMPLE_00072
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
3
2,013
true
FFPE
3.38
282.7
50.27
91.19
false
true
true
false
true
FFPE
168.1
55.6
96.19
0.383
0
true
true
false
true
false
DQ_SAMPLE_00073
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
6
2,020
true
FFPE
4.72
328.6
30.81
69.97
false
true
false
false
true
Blood
306.3
71.72
99.19
0.154
0.85
true
true
true
true
true
DQ_SAMPLE_00074
SSA_West
West
true
false
Female
Lab_B_USA
NovaSeq6000
2
2,019
true
FFPE
5.09
393.6
61.06
90.18
false
true
true
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00075
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
4
2,017
false
null
null
null
null
null
false
false
false
false
false
null
null
null
null
null
null
false
false
false
false
false
DQ_SAMPLE_00076
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
7
2,013
true
FFPE
3.36
369
36.79
84.86
false
true
true
false
true
Blood
299
69.79
99.42
0.209
1.14
true
true
true
true
true
DQ_SAMPLE_00077
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
1
2,016
true
Blood_PAXgene
7.82
424.6
49.91
78.23
true
true
false
false
true
FFPE
662.2
65.74
86.8
0.329
1.14
true
true
false
true
false
DQ_SAMPLE_00078
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
4
2,016
true
FFPE
4.52
639.5
36.1
89.47
false
true
true
false
true
Fresh_frozen
794.7
78.61
89.23
0.214
0.02
true
true
true
true
true
DQ_SAMPLE_00079
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
12
2,018
true
Fresh_frozen
5.51
606.5
53.85
93.43
false
true
true
false
true
Fresh_frozen
1,041.2
80.14
96.67
0.264
0.74
true
true
false
true
false
DQ_SAMPLE_00080
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
3
2,020
true
FFPE
4.16
210.8
40.36
80.87
false
true
true
false
true
FFPE
181.3
60.34
91.89
0.261
0.77
true
true
false
true
false
DQ_SAMPLE_00081
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
3
2,016
true
Fresh_frozen
6.95
923.9
48.42
85.2
true
true
true
true
true
FFPE
157.9
64.17
98.25
0.216
1.09
true
true
true
true
true
DQ_SAMPLE_00082
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
11
2,019
true
Blood_PAXgene
6.89
333
62.2
90.8
true
true
true
true
true
FFPE
529.8
70.04
92.54
0.23
0.79
true
true
true
true
true
DQ_SAMPLE_00083
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
9
2,016
true
FFPE
5.55
156
31.2
86.06
false
true
true
false
true
FFPE
426.3
66.45
94.45
0.326
0.98
true
true
false
true
false
DQ_SAMPLE_00084
SSA_West
West
true
false
Female
Lab_SSA_1
NovaSeq6000
4
2,020
true
FFPE
4.9
239.5
46.39
96.11
false
true
true
false
true
FFPE
984.3
74.46
94.2
0.231
1.08
true
true
true
true
true
DQ_SAMPLE_00085
SSA_West
West
true
false
Female
Lab_B_USA
HiSeq4000
5
2,017
true
Fresh_frozen
7.79
1,632.7
34.15
85.64
true
true
true
true
true
Fresh_frozen
994.5
93.84
91.87
0.005
1.79
true
true
true
true
true
DQ_SAMPLE_00086
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
7
2,012
true
Fresh_frozen
7.69
1,117.7
27.67
80.87
true
true
true
true
true
FFPE
552.1
56.62
98.49
0.233
0.96
true
true
true
true
true
DQ_SAMPLE_00087
SSA_West
West
true
false
Female
Lab_SSA_1
NextSeq550
1
2,014
true
Fresh_frozen
6.28
165.9
36.44
84.23
false
true
true
false
true
FFPE
400.5
68.27
93.68
0.376
0.47
true
true
false
true
false
DQ_SAMPLE_00088
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
9
2,017
true
FFPE
4.41
799.5
40.89
89.84
false
true
true
false
true
FFPE
331.9
71.99
92.7
0.235
1.9
true
true
true
true
true
DQ_SAMPLE_00089
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
8
2,023
true
Fresh_frozen
6.71
1,331.3
47.48
81.55
true
true
true
true
true
FFPE
561.9
66.45
92.95
0.341
0.94
true
true
false
true
false
DQ_SAMPLE_00090
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
4
2,024
false
null
null
null
null
null
false
false
false
false
true
Blood
420.8
70.26
94.77
0.136
0.94
true
true
true
true
true
DQ_SAMPLE_00091
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
2
2,023
true
FFPE
2.97
432.5
43.98
87.59
false
true
true
false
true
FFPE
203.7
55.93
87.39
0.278
0.98
true
true
false
true
false
DQ_SAMPLE_00092
SSA_West
West
true
false
Female
Lab_SSA_2
NextSeq550
8
2,019
true
Fresh_frozen
7.21
232.7
22.89
79.42
true
true
false
false
true
FFPE
896
41.41
90.52
0.234
1.19
true
true
true
true
true
DQ_SAMPLE_00093
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
7
2,020
true
Blood_PAXgene
8.09
360.6
25.74
83.28
true
true
true
true
true
FFPE
475.3
47.87
93.27
0.303
1.25
true
true
false
true
false
DQ_SAMPLE_00094
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
12
2,024
false
null
null
null
null
null
false
false
false
false
true
FFPE
238.7
55.45
95.62
0.298
0.89
true
true
false
true
false
DQ_SAMPLE_00095
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
2
2,015
true
FFPE
6.08
179.3
17.63
82.33
false
false
true
false
true
FFPE
170.6
47.13
90.61
0.276
0.28
true
true
false
true
false
DQ_SAMPLE_00096
SSA_West
West
true
false
Female
Lab_SSA_1
HiSeq4000
5
2,021
false
null
null
null
null
null
false
false
false
false
true
FFPE
223.9
57.43
94.58
0.241
1.35
true
true
true
true
true
DQ_SAMPLE_00097
SSA_West
West
true
false
Female
Lab_C_EAS
NextSeq550
8
2,012
true
Fresh_frozen
7.17
375.6
22.96
96.29
true
true
true
true
true
Fresh_frozen
1,267.4
84.88
89.28
0.164
0.69
true
true
true
true
true
DQ_SAMPLE_00098
SSA_West
West
true
false
Female
Lab_SSA_2
NovaSeq6000
11
2,024
true
Blood_PAXgene
5.15
447.4
48.53
91.51
false
true
true
false
true
FFPE
222.3
37.3
91.69
0.327
0.65
true
true
false
true
false
DQ_SAMPLE_00099
SSA_West
West
true
false
Female
Lab_SSA_2
HiSeq4000
9
2,013
true
FFPE
5.98
196.8
46.08
85.95
false
true
true
false
true
Fresh_frozen
611.3
76.96
95.58
0.214
1.14
true
true
true
true
true
DQ_SAMPLE_00100
SSA_West
West
true
false
Male
Lab_SSA_2
NovaSeq6000
6
2,020
true
FFPE
5.44
141.4
50.73
93.98
false
true
true
false
true
Fresh_frozen
1,111.8
74.05
93.96
0.104
1.56
true
true
true
true
true